Transcript: ENSRNOT00000064184.6 Slc17a7-202

Description

solute carrier family 17 member 7 [Source:RGD Symbol;Acc:620101]

Gene Synonyms

BNPI, Vglut1

Location

Primary_assembly 1: 104,786,328-104,797,010 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 41 domains and features, is associated with 47 variant alleles and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000020650.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028064.7	Slc17a7-201	3189	635aa	ENSRNOP00000028064.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62634-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000151521.1	Slc17a7-203	2748	537aa	ENSRNOP00000099148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000064184.6	Slc17a7-202	1811	585aa	ENSRNOP00000063604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q62634-2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,811 bps, Translation length: 585 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62634

Version

ENSRNOT00000064184.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000064184.6 Slc17a7-202

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Transcript: ENSRNOT00000064184.6 Slc17a7-202

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