Transcript: ENSRNOT00000064078.3 Col23a1-201

Description

collagen type XXIII alpha 1 chain [Source:RGD Symbol;Acc:727898]

Gene Synonyms

LOC100910384, LOC103693323

Location

About this transcript

This transcript has 29 exons, is annotated with 28 domains and features, is associated with 965 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000064078.3	Col23a1-201	3417	532aa	ENSRNOP00000062298.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZFT7 Q810Y4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000150006.1	Col23a1-202	3414	531aa	ENSRNOP00000111932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000152058.1	Col23a1-203	1837	530aa	ENSRNOP00000099046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 3,417 bps, Translation length: 532 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q810Y4

Version

ENSRNOT00000064078.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.