Transcript: ENSRNOT00000063891.3 Cdc42se2-ps1-201

Description

CDC42 small effector 2, pseudogene 1 [Source:RGD Symbol;Acc:2318957]

Gene Synonyms

AABR07003049.1, LOC100191012, LOC100362023, LOC502327, LOC686503, LOC691031, MGC156730, MGC189425, RGD1563924

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 247 variant alleles and maps to 205 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103241.1	Cdc42se2-ps1-202	2612	84aa	ENSRNOP00000088149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V9GZ87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000063891.3	Cdc42se2-ps1-201	2859	83aa	ENSRNOP00000061001.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1K4 V9GZ87	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 2,859 bps, Translation length: 83 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1L1K4

Version

ENSRNOT00000063891.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.