Transcript: ENSRNOT00000061515.7 Clasp1-202

Description

cytoplasmic linker associated protein 1 [Source:RGD Symbol;Acc:1310970]

Gene Synonyms

LOC304740

Location

Primary_assembly 13: 32,046,444-32,267,924 forward strand.

About this transcript

This transcript has 42 exons, is annotated with 48 domains and features, is associated with 1021 variant alleles and maps to 364 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000002376.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000061516.7	Clasp1-203	7532	1578aa	ENSRNOP00000058234.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000099252.2	Clasp1-208	7526	1576aa	ENSRNOP00000091698.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEZ5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000084506.3	Clasp1-204	7424	1542aa	ENSRNOP00000068667.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTD7	-
ENSRNOT00000061515.7	Clasp1-202	7409	1537aa	ENSRNOP00000058233.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNR0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000106487.2	Clasp1-209	7283	1495aa	ENSRNOP00000078541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZL32	-
ENSRNOT00000093066.3	Clasp1-206	7279	1502aa	ENSRNOP00000075946.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B0GWM1	-
ENSRNOT00000061513.6	Clasp1-201	7237	1488aa	ENSRNOP00000058231.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNR1	-
ENSRNOT00000093127.3	Clasp1-207	6164	1247aa	ENSRNOP00000076002.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B0GWS3	-
ENSRNOT00000086641.3	Clasp1-205	4995	1539aa	ENSRNOP00000069110.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUI5	-

Summary

Statistics

Exons: 42, Coding exons: 41, Transcript length: 7,409 bps, Translation length: 1,537 residues

Version

ENSRNOT00000061515.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000061515.7 Clasp1-202

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Transcript: ENSRNOT00000061515.7 Clasp1-202

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