Transcript: ENSRNOT00000061233.5 Ubqln1-201

Description

ubiquilin 1 [Source:RGD Symbol;Acc:620745]

Gene Synonyms

Da41, PLIC-1

Location

About this transcript

This transcript has 10 exons, is annotated with 29 domains and features, is associated with 113 variant alleles and maps to 221 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120206.1	Ubqln1-202	2264	582aa	ENSRNOP00000084505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZXD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000061233.5	Ubqln1-201	3564	554aa	ENSRNOP00000057944.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAI1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,564 bps, Translation length: 554 residues

Version

ENSRNOT00000061233.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.