Transcript: ENSRNOT00000057673.5 Limk2-203

Description

LIM domain kinase 2 [Source:RGD Symbol;Acc:62056]

Gene Synonyms

LIMK-2, Limk2b, Link2

Location

Primary_assembly 14: 82,441,708-82,509,644 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 36 domains and features, is associated with 376 variant alleles and maps to 215 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000019000.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000057673.5	Limk2-203	3467	642aa	ENSRNOP00000054482.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QS45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000050005.5	Limk2-202	3702	623aa	ENSRNOP00000044951.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QN67	-
ENSRNOT00000123429.1	Limk2-204	3702	623aa	ENSRNOP00000108912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000163662.1	Limk2-206	3496	606aa	ENSRNOP00000109319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000026032.8	Limk2-201	3455	638aa	ENSRNOP00000026032.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P53670-1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000139208.1	Limk2-205	2321	622aa	ENSRNOP00000106502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,467 bps, Translation length: 642 residues

Version

ENSRNOT00000057673.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000057673.5 Limk2-203

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Transcript: ENSRNOT00000057673.5 Limk2-203

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