Transcript: ENSRNOT00000057472.5 Slc11a1-201

Description

solute carrier family 11 member 1 [Source:RGD Symbol;Acc:1601463]

Gene Synonyms

Bcg, Itg, Lsh, MGC124692, Nramp1

Location

About this transcript

This transcript has 14 exons, is annotated with 47 domains and features, is associated with 49 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000088679.3	Slc11a1-203	2133	548aa	ENSRNOP00000071174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZT3 A6JVU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000057472.5	Slc11a1-201	1988	507aa	ENSRNOP00000054282.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSN8	-
ENSRNOT00000083421.3	Slc11a1-202	1149	336aa	ENSRNOP00000075229.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KA24	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,988 bps, Translation length: 507 residues

Version

ENSRNOT00000057472.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.