Transcript: ENSRNOT00000055801.6 Ptpra-201

Description

protein tyrosine phosphatase, receptor type, A [Source:RGD Symbol;Acc:3450]

Gene Synonyms

LRP, MGC93561

Location

About this transcript

This transcript has 24 exons, is annotated with 40 domains and features, is associated with 239 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000055801.6	Ptpra-201	3006	827aa	ENSRNOP00000052657.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8YBN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000162829.1	Ptpra-205	3145	791aa	ENSRNOP00000109915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000147780.1	Ptpra-203	2987	805aa	ENSRNOP00000103665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000080379.3	Ptpra-202	2921	783aa	ENSRNOP00000069583.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVR0	-
ENSRNOT00000159514.1	Ptpra-204	2889	751aa	ENSRNOP00000106708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 3,006 bps, Translation length: 827 residues

Version

ENSRNOT00000055801.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 8, 9.