Transcript: ENSRNOT00000055272.4 Pde1b-201

Description

phosphodiesterase 1B [Source:RGD Symbol;Acc:3278]

Gene Synonyms

Aop2, Pde1b1

Location

About this transcript

This transcript has 16 exons, is annotated with 25 domains and features, is associated with 85 variant alleles and maps to 231 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000055272.4	Pde1b-201	2993	535aa	ENSRNOP00000052147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q01066	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000099138.1	Pde1b-202	2936	516aa	ENSRNOP00000095772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ANV0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 2,993 bps, Translation length: 535 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01066

Version

ENSRNOT00000055272.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.