Transcript: ENSRNOT00000051496.8 Map3k5-201

Description

mitogen-activated protein kinase kinase kinase 5 [Source:RGD Symbol;Acc:1306565]

Gene Synonyms

Ask1, LOC365057, RGD1306565

Location

Primary_assembly 1: 16,505,596-16,723,898 forward strand.

About this transcript

This transcript has 31 exons, is annotated with 29 domains and features, is associated with 1388 variant alleles and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000031700.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000051496.8	Map3k5-201	5076	1381aa	ENSRNOP00000051338.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZZH6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000096116.2	Map3k5-203	5076	1381aa	ENSRNOP00000090845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEL0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000104843.2	Map3k5-204	5052	1373aa	ENSRNOP00000084904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A280	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000067070.5	Map3k5-202	4778	1365aa	ENSRNOP00000063417.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZW27	-
ENSRNOT00000163616.1	Map3k5-205	4181	1277aa	ENSRNOP00000103302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 5,076 bps, Translation length: 1,381 residues

Version

ENSRNOT00000051496.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000051496.8 Map3k5-201

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Transcript: ENSRNOT00000051496.8 Map3k5-201

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