Transcript: ENSRNOT00000051149.4 Rps4x-ps13-202

Description

ribosomal protein S4, X-linked, pseudo 13 [Source:RGD Symbol;Acc:1590988]

Gene Synonyms

LOC690845, Rps4y2

Location

About this transcript

This transcript has 2 exons, is annotated with 16 domains and features, is associated with 83 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000051149.4	Rps4x-ps13-202	1203	336aa	ENSRNOP00000043988.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHX3 P62703	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000043543.4	Rps4x-ps13-201	1128	315aa	ENSRNOP00000049546.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZX01	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,203 bps, Translation length: 336 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62703

Version

ENSRNOT00000051149.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.