Transcript: ENSRNOT00000050914.5 Sema6c-202

Description

semaphorin 6C [Source:RGD Symbol;Acc:3659]

Gene Synonyms

Sema Y

Location

About this transcript

This transcript has 20 exons, is annotated with 40 domains and features, is associated with 84 variant alleles and maps to 241 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000050914.5	Sema6c-202	3998	960aa	ENSRNOP00000050221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9WTL3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000028645.7	Sema6c-201	3827	928aa	ENSRNOP00000028645.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9WTL3-2	-
ENSRNOT00000090729.3	Sema6c-203	3173	920aa	ENSRNOP00000071511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2W3 A6K2W4	-

Summary

Statistics

Exons: 20, Coding exons: 18, Transcript length: 3,998 bps, Translation length: 960 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WTL3

Version

ENSRNOT00000050914.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.