Transcript: ENSRNOT00000050222.10 Nrcam-201

Description

neuronal cell adhesion molecule [Source:RGD Symbol;Acc:3209]

Gene Synonyms

nr-CAM

Location

Primary_assembly 6: 67,129,817-67,422,259 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 78 domains and features, is associated with 1442 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000004067.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120680.2	Nrcam-205	5756	1308aa	ENSRNOP00000098312.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000059739.8	Nrcam-202	7277	1214aa	ENSRNOP00000056494.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8YHB8	-
ENSRNOT00000120704.2	Nrcam-206	7247	1204aa	ENSRNOP00000098335.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000050222.10	Nrcam-201	7241	1202aa	ENSRNOP00000044341.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1W5DU98	-
ENSRNOT00000083088.5	Nrcam-203	7078	1205aa	ENSRNOP00000072959.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K498 A6HBE7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000091677.4	Nrcam-204	6808	1214aa	ENSRNOP00000069715.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JW27 A0A8J8XN34	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000120708.2	Nrcam-209	5861	1262aa	ENSRNOP00000098339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000120706.2	Nrcam-207	5533	1234aa	ENSRNOP00000098337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000120707.2	Nrcam-208	4880	1193aa	ENSRNOP00000098338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 30, Coding exons: 27, Transcript length: 7,241 bps, Translation length: 1,202 residues

Version

ENSRNOT00000050222.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000050222.10 Nrcam-201

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Transcript: ENSRNOT00000050222.10 Nrcam-201

Summary

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