Transcript: ENSRNOT00000048506.5 Col9a2-201

Description

collagen type IX alpha 2 chain [Source:RGD Symbol;Acc:1307029]

Gene Synonyms

LOC362584

Location

About this transcript

This transcript has 32 exons, is annotated with 41 domains and features, is associated with 54 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000048506.5	Col9a2-201	2954	688aa	ENSRNOP00000049994.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IS03 D3ZNT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000104027.2	Col9a2-203	3039	671aa	ENSRNOP00000089485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GHC4	-
ENSRNOT00000096235.2	Col9a2-202	2563	683aa	ENSRNOP00000084283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWW1	-

Summary

Statistics

Exons: 32, Coding exons: 32, Transcript length: 2,954 bps, Translation length: 688 residues

Version

ENSRNOT00000048506.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.