Transcript: ENSRNOT00000048270.7 Prdm1-201

Description

PR/SET domain 1 [Source:RGD Symbol;Acc:1311765]

Gene Synonyms

LOC309871

Location

About this transcript

This transcript has 7 exons, is annotated with 39 domains and features, is associated with 124 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000076541.3	Prdm1-202	5037	857aa	ENSRNOP00000068267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJU6 A6K6V8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000169668.1	Prdm1-203	5175	831aa	ENSRNOP00000105859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000048270.7	Prdm1-201	5158	824aa	ENSRNOP00000040939.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A1S2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 5,158 bps, Translation length: 824 residues

Version

ENSRNOT00000048270.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.