Transcript: ENSRNOT00000048146.4 Tex56p-201

Description

testis expressed 56 [Source:RGD Symbol;Acc:1307537]

Gene Synonyms

C17h6orf201, LOC291077, RGD1307537

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 129 variant alleles and maps to 108 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000048146.4	Tex56p-201	883	219aa	ENSRNOP00000039407.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000097793.1	Tex56p-202	898	208aa	ENSRNOP00000097380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B5P6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 883 bps, Translation length: 219 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6AXY2

Version

ENSRNOT00000048146.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.