Transcript: ENSRNOT00000048043.5 Cacna2d3-201

Description

calcium voltage-gated channel auxiliary subunit alpha2delta 3 [Source:RGD Symbol;Acc:631361]

Gene Synonyms

LOC108353110

Location

About this transcript

This transcript has 37 exons, is annotated with 21 domains and features, is associated with 5417 variant alleles and maps to 281 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000048043.5	Cacna2d3-201	3710	1066aa	ENSRNOP00000042602.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSR8 Q8CFG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000117613.2	Cacna2d3-202	3568	1054aa	ENSRNOP00000097929.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AST9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 37, Coding exons: 37, Transcript length: 3,710 bps, Translation length: 1,066 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CFG5

Version

ENSRNOT00000048043.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.