Transcript: ENSRNOT00000047975.7 Ppp3ca-201

Description

protein phosphatase 3 catalytic subunit alpha [Source:RGD Symbol;Acc:3382]

Gene Synonyms

Calna1

Location

Primary_assembly 2: 227,839,435-228,112,499 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 18 domains and features, is associated with 2105 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000009882.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000173700.1	Ppp3ca-204	3246	521aa	ENSRNOP00000104489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000105262.2	Ppp3ca-202	3018	461aa	ENSRNOP00000082751.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P63329-1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000047975.7	Ppp3ca-201	2814	503aa	ENSRNOP00000049674.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P63329-2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000117502.2	Ppp3ca-203	2162	465aa	ENSRNOP00000077502.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y7T7	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,814 bps, Translation length: 503 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P63329

Version

ENSRNOT00000047975.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000047975.7 Ppp3ca-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000047975.7 Ppp3ca-201

Summary

About Us

Get help

Our sister sites

Follow us