Transcript: ENSRNOT00000047854.4 Agrn-202

Description

agrin [Source:RGD Symbol;Acc:2067]

Gene Synonyms

AGR

Location

About this transcript

This transcript has 37 exons, is annotated with 143 domains and features, is associated with 128 variant alleles and maps to 507 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000047854.4	Agrn-202	11280	2047aa	ENSRNOP00000040828.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A2F1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000045678.6	Agrn-201	11268	2043aa	ENSRNOP00000050623.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LPF2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 37, Coding exons: 37, Transcript length: 11,280 bps, Translation length: 2,047 residues

Version

ENSRNOT00000047854.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.