Transcript: ENSRNOT00000047572.5 Olfm4-201

Description

olfactomedin 4 [Source:RGD Symbol;Acc:1311708]

Gene Synonyms

LOC290409

Location

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 194 variant alleles and maps to 76 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000047572.5	Olfm4-201	2731	511aa	ENSRNOP00000039120.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HU14 D3ZMI6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000150757.1	Olfm4-202	2867	470aa	ENSRNOP00000112596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,731 bps, Translation length: 511 residues

Version

ENSRNOT00000047572.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.