Transcript: ENSRNOT00000047488.7 Pou2f1-201

Description

POU class 2 homeobox 1 [Source:RGD Symbol;Acc:621689]

Gene Synonyms

NF-A1, OTF-1, oct-1

Location

About this transcript

This transcript has 16 exons, is annotated with 49 domains and features, is associated with 547 variant alleles and maps to 237 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000047488.7	Pou2f1-201	2667	800aa	ENSRNOP00000044416.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LRD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115647.2	Pou2f1-203	2751	757aa	ENSRNOP00000092131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEY3 A6IDI8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000126850.1	Pou2f1-205	2547	760aa	ENSRNOP00000098938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000118670.2	Pou2f1-204	2365	705aa	ENSRNOP00000094292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHE9	-
ENSRNOT00000087096.3	Pou2f1-202	2301	712aa	ENSRNOP00000072711.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K3N5	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,667 bps, Translation length: 800 residues

Version

ENSRNOT00000047488.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.