Transcript: ENSRNOT00000046598.8 Slco1a5-202

Description

solute carrier organic anion transporter family, member 1A5 [Source:RGD Symbol;Acc:70985]

Gene Synonyms

OATP-3, Oatp3, Slc21a7, Slco1a2

Location

About this transcript

This transcript has 14 exons, is annotated with 49 domains and features, is associated with 223 variant alleles and maps to 213 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000043374.5	Slco1a5-201	2820	661aa	ENSRNOP00000042595.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IMP7 O35913	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000046598.8	Slco1a5-202	3501	660aa	ENSRNOP00000040237.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QJT4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,501 bps, Translation length: 660 residues

Version

ENSRNOT00000046598.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.