Transcript: ENSRNOT00000046463.6 Aptx-201

Description

aprataxin [Source:RGD Symbol;Acc:628740]

Location

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 152 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000046463.6	Aptx-201	1413	329aa	ENSRNOP00000046400.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IIS0 Q8K4H4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000090891.3	Aptx-202	1183	300aa	ENSRNOP00000072443.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R5W7	-
ENSRNOT00000094147.2	Aptx-203	1146	240aa	ENSRNOP00000094856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKE7	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,413 bps, Translation length: 329 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8K4H4

Version

ENSRNOT00000046463.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.