Transcript: ENSRNOT00000046318.6 Prdm15-201

Description

PR/SET domain 15 [Source:RGD Symbol;Acc:1310055]

Gene Synonyms

LOC304054

Location

About this transcript

This transcript has 24 exons, is annotated with 88 domains and features, is associated with 150 variant alleles and maps to 213 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000046318.6	Prdm15-201	5176	1148aa	ENSRNOP00000041592.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZQ99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000114092.1	Prdm15-202	5059	1109aa	ENSRNOP00000084210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZYR1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 5,176 bps, Translation length: 1,148 residues

Version

ENSRNOT00000046318.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.