Transcript: ENSRNOT00000046126.5 Kars1-201

Description

lysyl-tRNA synthetase 1 [Source:RGD Symbol;Acc:1359653]

Gene Synonyms

Kars, LysRS, MGC94484

Location

About this transcript

This transcript has 15 exons, is annotated with 26 domains and features, is associated with 556 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000046126.5	Kars1-201	2165	626aa	ENSRNOP00000044454.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XIM7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000117076.2	Kars1-202	1985	597aa	ENSRNOP00000080260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPX4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,165 bps, Translation length: 626 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5XIM7

Version

ENSRNOT00000046126.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.