Transcript: ENSRNOT00000046085.7 Atl1-201

Description

atlastin GTPase 1 [Source:RGD Symbol;Acc:1359232]

Gene Synonyms

LOC362750, MGC109404, Spg3a

Location

About this transcript

This transcript has 14 exons, is annotated with 20 domains and features, is associated with 267 variant alleles and maps to 188 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116837.2	Atl1-202	3071	558aa	ENSRNOP00000084485.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GAH6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000046085.7	Atl1-201	2913	553aa	ENSRNOP00000041993.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PST4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,913 bps, Translation length: 553 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PST4

Version

ENSRNOT00000046085.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.