Transcript: ENSRNOT00000045795.4 Cxxc5-201

Description

CXXC finger protein 5 [Source:RGD Symbol;Acc:1359466]

Gene Synonyms

MGC94398

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 108 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000045795.4	Cxxc5-201	1694	316aa	ENSRNOP00000042976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J2Z8 Q5XIQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000104184.2	Cxxc5-202	4225	306aa	ENSRNOP00000094752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AID9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 1,694 bps, Translation length: 316 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5XIQ3

Version

ENSRNOT00000045795.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.