Transcript: ENSRNOT00000045765.7 Frmd4a-201

Description

FERM domain containing 4A [Source:RGD Symbol;Acc:1309050]

Gene Synonyms

LOC307128, RGD1309050

Location

Primary_assembly 17: 78,579,277-78,758,233 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 47 domains and features, is associated with 903 variant alleles and maps to 238 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000018500.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104402.2	Frmd4a-205	4539	1079aa	ENSRNOP00000096584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AR03	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000105615.2	Frmd4a-206	4386	1061aa	ENSRNOP00000095559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APE6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000096103.2	Frmd4a-204	4362	1053aa	ENSRNOP00000095782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B3B1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000081645.3	Frmd4a-202	4341	1046aa	ENSRNOP00000072339.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2R0	-
ENSRNOT00000162805.1	Frmd4a-210	4329	1042aa	ENSRNOP00000106415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000113916.2	Frmd4a-207	4323	1040aa	ENSRNOP00000084435.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZA8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000157384.1	Frmd4a-209	4322	1020aa	ENSRNOP00000104195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000148653.1	Frmd4a-208	4152	983aa	ENSRNOP00000099965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000045765.7	Frmd4a-201	4010	1002aa	ENSRNOP00000044582.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZU85	-
ENSRNOT00000095260.2	Frmd4a-203	3356	1031aa	ENSRNOP00000097387.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GMH6	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 4,010 bps, Translation length: 1,002 residues

Version

ENSRNOT00000045765.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000045765.7 Frmd4a-201

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Transcript: ENSRNOT00000045765.7 Frmd4a-201

Summary

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