Transcript: ENSRNOT00000045513.5 Grik3-201

Description

glutamate ionotropic receptor kainate type subunit 3 [Source:RGD Symbol;Acc:71027]

Gene Synonyms

GluK3, GluR7, gluR-7

Location

Primary_assembly 5: 143,052,442-143,268,873 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 34 domains and features, is associated with 1390 variant alleles and maps to 227 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000008992.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000045513.5	Grik3-201	3634	910aa	ENSRNOP00000048216.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IS79 G3V9I2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000152221.1	Grik3-203	3665	898aa	ENSRNOP00000103866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103338.2	Grik3-202	3382	892aa	ENSRNOP00000089586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GHG4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,634 bps, Translation length: 910 residues

Version

ENSRNOT00000045513.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000045513.5 Grik3-201

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Transcript: ENSRNOT00000045513.5 Grik3-201

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