Transcript: ENSRNOT00000045315.5 Col18a1-201

Description

collagen type XVIII alpha 1 chain [Source:RGD Symbol;Acc:70936]

Location

About this transcript

This transcript has 41 exons, is annotated with 51 domains and features, is associated with 650 variant alleles and maps to 324 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116507.1	Col18a1-203	6770	1785aa	ENSRNOP00000096747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLR1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000095032.1	Col18a1-202	5034	1320aa	ENSRNOP00000082737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZV54	-
ENSRNOT00000045315.5	Col18a1-201	5007	1311aa	ENSRNOP00000047962.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LR02	-

Summary

Statistics

Exons: 41, Coding exons: 41, Transcript length: 5,007 bps, Translation length: 1,311 residues

Version

ENSRNOT00000045315.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.