Transcript: ENSRNOT00000044134.8 Pan3-201

Description

poly(A) specific ribonuclease subunit PAN3 [Source:RGD Symbol;Acc:1590880]

Gene Synonyms

LOC360760

Location

Primary_assembly 12: 12,512,835-12,631,492 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 22 domains and features, is associated with 356 variant alleles and maps to 360 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000000942.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000125544.1	Pan3-203	4050	887aa	ENSRNOP00000106896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000044134.8	Pan3-201	5724	883aa	ENSRNOP00000040388.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ADM2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000083249.3	Pan3-202	5562	829aa	ENSRNOP00000076931.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y6J5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 5,724 bps, Translation length: 883 residues

Version

ENSRNOT00000044134.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000044134.8 Pan3-201

Summary

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Transcript: ENSRNOT00000044134.8 Pan3-201

Summary

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