Transcript: ENSRNOT00000041175.6 Prdm2-201

Description

PR/SET domain 2 [Source:RGD Symbol;Acc:1594531]

Gene Synonyms

Prdm2_mapped, Riz

Location

About this transcript

This transcript has 10 exons, is annotated with 87 domains and features, is associated with 615 variant alleles and maps to 309 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000041175.6	Prdm2-201	6150	1706aa	ENSRNOP00000046011.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQ66	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000124287.1	Prdm2-202	6177	1671aa	ENSRNOP00000106619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000168952.1	Prdm2-203	6028	1650aa	ENSRNOP00000111833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 6,150 bps, Translation length: 1,706 residues

Version

ENSRNOT00000041175.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.