Transcript: ENSRNOT00000038874.9 Igfn1-201

Description

immunoglobulin-like and fibronectin type III domain containing 1 [Source:RGD Symbol;Acc:1565384]

Gene Synonyms

Igfn1-ps1, LOC304823, RGD1565384

Location

About this transcript

This transcript has 25 exons, is annotated with 93 domains and features, is associated with 323 variant alleles and maps to 250 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000038874.9	Igfn1-201	8861	2810aa	ENSRNOP00000032079.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M2K0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000115528.2	Igfn1-202	3735	1244aa	ENSRNOP00000081219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS10	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 8,861 bps, Translation length: 2,810 residues

Version

ENSRNOT00000038874.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.