Transcript: ENSRNOT00000038160.6 Col6a5-201

Description

collagen type VI alpha 5 chain [Source:RGD Symbol;Acc:1565804]

Gene Synonyms

LOC315980, LOC501047, RGD1307220, RGD1565804

Location

About this transcript

This transcript has 38 exons, is annotated with 83 domains and features, is associated with 906 variant alleles and maps to 190 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112307.2	Col6a5-203	9113	2635aa	ENSRNOP00000081276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000082992.3	Col6a5-202	9099	2635aa	ENSRNOP00000068883.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTX7	-
ENSRNOT00000038160.6	Col6a5-201	8008	2605aa	ENSRNOP00000037852.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LZF4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 38, Coding exons: 37, Transcript length: 8,008 bps, Translation length: 2,605 residues

Version

ENSRNOT00000038160.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.