Transcript: ENSRNOT00000038160.5 Col6a5-201

Description

collagen type VI alpha 5 chain [Source:RGD Symbol;Acc:1565804]

Gene Synonyms

LOC315980, LOC501047, RGD1307220, RGD1565804

Location

About this transcript

This transcript has 38 exons, is annotated with 77 domains and features, is associated with 651 variant alleles and maps to 190 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000082992.2	Col6a5-202	8472	2635aa	ENSRNOP00000068883.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTX7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000112307.1	Col6a5-203	8472	2635aa	ENSRNOP00000081276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRM4	-
ENSRNOT00000038160.5	Col6a5-201	8000	2605aa	ENSRNOP00000037852.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LZF4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 38, Coding exons: 37, Transcript length: 8,000 bps, Translation length: 2,605 residues

Version

ENSRNOT00000038160.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.