Transcript: ENSRNOT00000035996.5 Dnajb6-201

Description

DnaJ heat shock protein family (Hsp40) member B6 [Source:RGD Symbol;Acc:1308207]

Gene Synonyms

HSJ-2, LOC108350642, LOC362293, MRJ, MSJ-1

Location

Primary_assembly 4: 6,168,498-6,232,004 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 22 domains and features, is associated with 220 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000010353.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000035996.5	Dnajb6-201	2449	357aa	ENSRNOP00000041883.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000118469.2	Dnajb6-204	1905	261aa	ENSRNOP00000093872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AML5 A6KJM9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000112530.2	Dnajb6-203	1021	243aa	ENSRNOP00000079539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G3F8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110545.2	Dnajb6-202	304	62aa	ENSRNOP00000080886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTZ6	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,449 bps, Translation length: 357 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6AYU3

Version

ENSRNOT00000035996.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000035996.5 Dnajb6-201

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Transcript: ENSRNOT00000035996.5 Dnajb6-201

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