Transcript: ENSRNOT00000035962.6 Ccdc170-201

Description

coiled-coil domain containing 170 [Source:RGD Symbol;Acc:1310945]

Gene Synonyms

LOC292266, RGD1310945

Location

About this transcript

This transcript has 13 exons, is annotated with 16 domains and features, is associated with 56 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000035962.6	Ccdc170-201	6968	718aa	ENSRNOP00000036286.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LT05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000093108.2	Ccdc170-202	2540	671aa	ENSRNOP00000076025.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B0GWU6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 6,968 bps, Translation length: 718 residues

Version

ENSRNOT00000035962.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.