Transcript: ENSRNOT00000035309.5 Heatr5a-201

Description

HEAT repeat containing 5A [Source:RGD Symbol;Acc:1561116]

Gene Synonyms

LOC362737, RGD1561116

Location

About this transcript

This transcript has 36 exons, is annotated with 18 domains and features, is associated with 246 variant alleles and maps to 335 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000119095.1	Heatr5a-202	7695	2030aa	ENSRNOP00000091464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AF96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000035309.5	Heatr5a-201	7732	1885aa	ENSRNOP00000035775.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSK5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 36, Coding exons: 32, Transcript length: 7,732 bps, Translation length: 1,885 residues

Version

ENSRNOT00000035309.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.