Transcript: ENSRNOT00000034814.8 Slf2-201

Description

SMC5-SMC6 complex localization factor 2 [Source:RGD Symbol;Acc:1560300]

Gene Synonyms

Fam178a, LOC499360, RGD1560300

Location

About this transcript

This transcript has 18 exons, is annotated with 33 domains and features, is associated with 138 variant alleles and maps to 269 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000082412.3	Slf2-202	6267	1164aa	ENSRNOP00000069230.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000034814.8	Slf2-201	6908	1134aa	ENSRNOP00000031171.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JHG9 D3ZF72	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 6,908 bps, Translation length: 1,134 residues

Version

ENSRNOT00000034814.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.