Transcript: ENSRNOT00000033200.6 Clip2-201

Description

CAP-GLY domain containing linker protein 2 [Source:RGD Symbol;Acc:62019]

Gene Synonyms

CLIP-115, Cyln2

Location

About this transcript

This transcript has 17 exons, is annotated with 40 domains and features, is associated with 520 variant alleles and maps to 231 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000033200.6	Clip2-201	4853	1047aa	ENSRNOP00000035734.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J0J0 G3V949	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000091328.3	Clip2-202	4881	1012aa	ENSRNOP00000071023.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZF2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 4,853 bps, Translation length: 1,047 residues

Version

ENSRNOT00000033200.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.