Transcript: ENSRNOT00000032667.9 Afdn-201

Description

afadin, adherens junction formation factor [Source:RGD Symbol;Acc:708561]

Gene Synonyms

Af6, Mllt4

Location

Primary_assembly 1: 58,041,641-58,170,505 forward strand.

About this transcript

This transcript has 33 exons, is annotated with 74 domains and features, is associated with 557 variant alleles and maps to 492 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000023753.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000032667.9	Afdn-201	7631	1892aa	ENSRNOP00000029044.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LT10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000107704.2	Afdn-205	7610	1885aa	ENSRNOP00000078878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLU6	-
ENSRNOT00000106034.2	Afdn-204	7481	1842aa	ENSRNOP00000088861.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O35889-1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000096238.2	Afdn-202	7143	1772aa	ENSRNOP00000079686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNL2	-
ENSRNOT00000096510.2	Afdn-203	7101	1758aa	ENSRNOP00000094008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL62	-

Summary

Statistics

Exons: 33, Coding exons: 33, Transcript length: 7,631 bps, Translation length: 1,892 residues

Version

ENSRNOT00000032667.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000032667.9 Afdn-201

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Transcript: ENSRNOT00000032667.9 Afdn-201

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