Transcript: ENSRNOT00000032202.6 Mbd1-202

Description

methyl-CpG binding domain protein 1 [Source:RGD Symbol;Acc:1305980]

Gene Synonyms

LOC291439

Location

Primary_assembly 18: 70,145,114-70,159,702 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 23 domains and features, is associated with 37 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000024104.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000019573.9	Mbd1-201	2901	632aa	ENSRNOP00000019573.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M6S6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000113558.2	Mbd1-205	4632	621aa	ENSRNOP00000097211.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AS94	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000102132.2	Mbd1-203	4414	565aa	ENSRNOP00000078508.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMU8	-
ENSRNOT00000111311.2	Mbd1-204	4357	578aa	ENSRNOP00000086562.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3W5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000032202.6	Mbd1-202	2807	601aa	ENSRNOP00000037640.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GMJ2 Q66HB8	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,807 bps, Translation length: 601 residues

Version

ENSRNOT00000032202.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000032202.6 Mbd1-202

Summary

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Transcript: ENSRNOT00000032202.6 Mbd1-202

Summary

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