Transcript: ENSRNOT00000031946.8 Ttc41-201

Description

tetratricopeptide repeat domain 41 [Source:RGD Symbol;Acc:1302940]

Gene Synonyms

Gnn, MGC72977, Nt5dc3

Location

Primary_assembly 7: 23,012,676-23,075,713 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 9 domains and features, is associated with 228 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000026807.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000139824.1	Ttc41-204	4693	1312aa	ENSRNOP00000103371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000059545.6	Ttc41-202	4684	1309aa	ENSRNOP00000056301.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQV7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000154529.1	Ttc41-205	4453	1232aa	ENSRNOP00000110261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000122498.1	Ttc41-203	4453	1232aa	ENSRNOP00000106666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000031946.8	Ttc41-201	4235	1292aa	ENSRNOP00000036382.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8WG20	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 4,235 bps, Translation length: 1,292 residues

Version

ENSRNOT00000031946.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000031946.8 Ttc41-201

Summary

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Transcript: ENSRNOT00000031946.8 Ttc41-201

Summary

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