Transcript: ENSRNOT00000030837.9 Parl-201

Description

presenilin associated, rhomboid-like [Source:RGD Symbol;Acc:1306191]

Gene Synonyms

LOC287979, MGC125008, Psarl

Location

Primary_assembly 11: 94,098,492-94,124,912 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 24 domains and features, is associated with 112 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000023271.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114687.2	Parl-204	1877	509aa	ENSRNOP00000093736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKF1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000134252.1	Parl-205	2646	481aa	ENSRNOP00000111183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000160119.1	Parl-206	1724	458aa	ENSRNOP00000108723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000071076.4	Parl-202	1355	389aa	ENSRNOP00000064548.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R589	-
ENSRNOT00000107477.2	Parl-203	1222	357aa	ENSRNOP00000087363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GF25	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000030837.9	Parl-201	1217	343aa	ENSRNOP00000029124.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LPN4	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,217 bps, Translation length: 343 residues

Version

ENSRNOT00000030837.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000030837.9 Parl-201

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Transcript: ENSRNOT00000030837.9 Parl-201

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