Transcript: ENSRNOT00000028821.6 Vps16-201

Description

VPS16 core subunit of CORVET and HOPS complexes [Source:RGD Symbol;Acc:1359414]

Gene Synonyms

MGC94090

Location

About this transcript

This transcript has 24 exons, is annotated with 9 domains and features, is associated with 41 variant alleles and maps to 281 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028821.6	Vps16-201	3380	839aa	ENSRNOP00000028821.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HQ90 F7FA01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000114809.2	Vps16-203	3454	804aa	ENSRNOP00000095488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GL61	-
ENSRNOT00000141135.1	Vps16-204	3101	801aa	ENSRNOP00000100464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099262.2	Vps16-202	2557	809aa	ENSRNOP00000083827.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZY36	-
ENSRNOT00000151498.1	Vps16-205	2529	794aa	ENSRNOP00000099250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,380 bps, Translation length: 839 residues

Version

ENSRNOT00000028821.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.