Transcript: ENSRNOT00000028740.7 Ecm1-201

Description

extracellular matrix protein 1 [Source:RGD Symbol;Acc:620357]

Location

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 41 variant alleles and maps to 179 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028740.7	Ecm1-201	1888	562aa	ENSRNOP00000028740.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QGP4 A6K307 Q62894	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000147837.1	Ecm1-203	1834	544aa	ENSRNOP00000105411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000105287.2	Ecm1-202	1736	547aa	ENSRNOP00000085798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A022	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,888 bps, Translation length: 562 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62894

Version

ENSRNOT00000028740.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.