Transcript: ENSRNOT00000028633.7 Trank1-201

Description

tetratricopeptide repeat and ankyrin repeat containing 1 [Source:RGD Symbol;Acc:1563130]

Gene Synonyms

LOC316022, RGD1563130

Location

Primary_assembly 8: 120,154,438-120,233,879 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 35 domains and features, is associated with 253 variant alleles and maps to 248 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000021091.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028633.7	Trank1-201	10700	2999aa	ENSRNOP00000028633.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZSG2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000165486.1	Trank1-203	10476	2959aa	ENSRNOP00000110556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000122532.1	Trank1-202	10003	2965aa	ENSRNOP00000104428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 10,700 bps, Translation length: 2,999 residues

Version

ENSRNOT00000028633.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000028633.7 Trank1-201

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Transcript: ENSRNOT00000028633.7 Trank1-201

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