Transcript: ENSRNOT00000028535.7 Stx3-202

Description

syntaxin 3 [Source:RGD Symbol;Acc:621005]

Gene Synonyms

Stx3a

Location

Primary_assembly 1: 218,065,960-218,110,420 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 19 domains and features, is associated with 438 variant alleles and maps to 246 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000021013.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028498.8	Stx3-201	1524	419aa	ENSRNOP00000028498.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A4C4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000028535.7	Stx3-202	2677	289aa	ENSRNOP00000028535.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08849	-
ENSRNOT00000119247.2	Stx3-206	2102	325aa	ENSRNOP00000078489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZL11	-
ENSRNOT00000102678.2	Stx3-204	2056	325aa	ENSRNOP00000097210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AS91	-
ENSRNOT00000173608.1	Stx3-210	1909	276aa	ENSRNOP00000110442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000170925.1	Stx3-209	1362	316aa	ENSRNOP00000106131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000142473.1	Stx3-208	1138	272aa	ENSRNOP00000099055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000120182.2	Stx3-207	1045	293aa	ENSRNOP00000097922.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GMR2	-
ENSRNOT00000112820.2	Stx3-205	991	287aa	ENSRNOP00000079624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRD1	-
ENSRNOT00000094739.2	Stx3-203	953	283aa	ENSRNOP00000092371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGY3	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,677 bps, Translation length: 289 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08849

Version

ENSRNOT00000028535.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000028535.7 Stx3-202

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Transcript: ENSRNOT00000028535.7 Stx3-202

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