Transcript: ENSRNOT00000027789.7 Nfatc4-201

Description

nuclear factor of activated T-cells 4 [Source:RGD Symbol;Acc:1310749]

Gene Synonyms

LOC102552386, NF-AT3, NF-ATc4

Location

Primary_assembly 15: 33,275,447-33,284,522 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 40 domains and features, is associated with 31 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000020482.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000153752.1	Nfatc4-203	2987	973aa	ENSRNOP00000101662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000089584.3	Nfatc4-202	3906	901aa	ENSRNOP00000071490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z9H7-2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000027789.7	Nfatc4-201	3170	901aa	ENSRNOP00000027789.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z9H7-1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,170 bps, Translation length: 901 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: D3Z9H7

Version

ENSRNOT00000027789.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000027789.7 Nfatc4-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000027789.7 Nfatc4-201

Summary

About Us

Get help

Our sister sites

Follow us