Transcript: ENSRNOT00000027340.7 Pcdha3-201

Description

protocadherin alpha 3 [Source:RGD Symbol;Acc:620336]

Location

Primary_assembly 18: 29,076,678-29,120,224 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 68 domains and features, is associated with 182 variant alleles and maps to 218 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000020119.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000074028.3	Pcdha3-207	5515	1031aa	ENSRNOP00000066853.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q767I9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000027340.7	Pcdha3-201	5848	1006aa	ENSRNOP00000027340.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q767H7	-
ENSRNOT00000027383.8	Pcdha3-203	5708	963aa	ENSRNOP00000027383.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q767I6	-
ENSRNOT00000027393.7	Pcdha3-204	5543	980aa	ENSRNOP00000027393.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q767I7	-
ENSRNOT00000079794.3	Pcdha3-210	5489	963aa	ENSRNOP00000075260.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q767I8-1	-
ENSRNOT00000077824.3	Pcdha3-209	5462	980aa	ENSRNOP00000074100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I6LBW4	-
ENSRNOT00000071366.3	Pcdha3-206	5453	950aa	ENSRNOP00000065957.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q767J0	-
ENSRNOT00000027402.5	Pcdha3-205	5447	948aa	ENSRNOP00000027402.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q767J1	-
ENSRNOT00000075810.4	Pcdha3-208	5447	949aa	ENSRNOP00000066774.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8XGC7	-
ENSRNOT00000027372.8	Pcdha3-202	5447	949aa	ENSRNOP00000027372.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q767I4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 5,848 bps, Translation length: 1,006 residues

Version

ENSRNOT00000027340.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000027340.7 Pcdha3-201

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Transcript: ENSRNOT00000027340.7 Pcdha3-201

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