Transcript: ENSRNOT00000027064.6 Gmppa-201

Description

GDP-mannose pyrophosphorylase A [Source:RGD Symbol;Acc:1560644]

Location

About this transcript

This transcript has 13 exons, is annotated with 11 domains and features, is associated with 73 variant alleles and maps to 200 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000109761.2	Gmppa-202	1675	425aa	ENSRNOP00000078288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000027064.6	Gmppa-201	1656	420aa	ENSRNOP00000027064.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JW33 Q5XIC1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,656 bps, Translation length: 420 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5XIC1

Version

ENSRNOT00000027064.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.